CloudLinux Update CLI error and server manager "warn info" to update in DA Panel system packages.

[admin]

Today I've got problem after updating CloudLinux Kernel to:

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[root@srv8 ~]# hostnamectl
   Static hostname: srv8.jsalfianmarketing.com
         Icon name: computer-server
           Chassis: server
        Machine ID: bf4742a85c4148e08f755e4d7803f9c7
           Boot ID: 726e9ce660ce4ce7abd43914d5c92b03
  Operating System: CloudLinux 8.10 (Vladimir Aksyonov)
       CPE OS Name: cpe:/o:cloudlinux:cloudlinux:8.10:GA:server
            Kernel: Linux 4.18.0-553.79.1.lve.el8.x86_64
      Architecture: x86-64
[root@srv8 ~]#

and after DA Panel upgraded to Version: 1.687 (48bacc1da381f670ef0c8c89b9181585261b3002)

Got something went wrong like this:

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[root@srv8 ~]# yum update
Waiting for process with pid... to finish
[root@srv8 ~]# 

then...
just wait the PID process to finish.

on CloudLinux this problem indicates that another process is currently holding the yum lock,
preventing the new yum instance from proceeding.
This is a common issue and can be resolved by identifying and addressing the conflicting process.

Or another problem like this:

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[root@srv8 ~]# yum update
error: rpmdb: BDB0113 Thread/process 31616/140314094414720 failed: BDB1507 Thread died in Berkeley DB library
error: db5 error(-30973) from dbenv->failchk: BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery
error: cannot open Packages index using db5 -  (-30973)
error: cannot open Packages database in /var/lib/rpm
Error: Error: rpmdb open failed
[root@srv8 ~]#

Use this special CLI instead:
Try clean the repo and update again once at a time:

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rpm --rebuilddb
rm /var/cache/dnf/metadata_lock.pid
dnf clean all
yum clean all
dnf update cloudlinux-release
yum update
cd /usr/local/directadmin && service directadmin restart && cd

Then the problems solved and no more server manager "warn info" to update in DA Panel system packages too.
Check again to confirm...

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[root@srv8 ~]# ping -c 5 repo.cloudlinux.com
PING repo.cloudlinux.com (5.78.141.80) 56(84) bytes of data.
64 bytes from static.80.141.78.5.clients.your-server.de (5.78.141.80): icmp_seq=1 ttl=51 time=18.9 ms
64 bytes from static.80.141.78.5.clients.your-server.de (5.78.141.80): icmp_seq=2 ttl=51 time=18.8 ms
64 bytes from static.80.141.78.5.clients.your-server.de (5.78.141.80): icmp_seq=3 ttl=51 time=18.7 ms
64 bytes from static.80.141.78.5.clients.your-server.de (5.78.141.80): icmp_seq=4 ttl=51 time=18.7 ms
64 bytes from static.80.141.78.5.clients.your-server.de (5.78.141.80): icmp_seq=5 ttl=51 time=18.7 ms

--- repo.cloudlinux.com ping statistics ---
5 packets transmitted, 5 received, 0% packet loss, time 4007ms
rtt min/avg/max/mdev = 18.676/18.758/18.939/0.129 ms

[root@srv8 ~]# yum update
This system is receiving updates from CloudLinux Network server.
cloudlinux-x86_64-server-8                                                                                              8.0 MB/s | 102 MB     00:12    
Last metadata expiration check: 0:00:01 ago on Fri 31 Oct 2025 01:15:26 AM PDT.
Dependencies resolved.
Nothing to do.
Complete!
[root@srv8 ~]#